Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGGAAGGTAGACGGCCAGAGA&CTTTGGTTGATTTATCTTGTGACAG
(((.((((((((((((((((((.&))))))))).)))))))).).))).
Details
MiRNAhsa-miR-3190-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1534,1559
Score1.0
Seed0
Au0.574
Energy-21.1
Binding len25
Me-6.97
Phylopstem3.99417788
Phylopflank4.05845682
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure