Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGGAAGGTAGACGGCCAGAGA&CTTTGGTCTATGACCTCTGATATCTACT
.(((((((((....((((((((.&))))))))....))))......))))).
Details
MiRNAhsa-miR-3190-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1363,1391
Score1.0
Seed1
Au0.676
Energy-19.3
Binding len28
Me-12.111
Phylopstem3.068710906666667
Phylopflank3.2172241275000006
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure