Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGGCGGCAGGGGCCTC&GATCCTTCTGCCGTCAAACCA
.(((((((((((((..((&))..)))))))))))...)).
Details
MiRNAhsa-miR-3196
RefseqIDNM_004362
GeneSymbolCLGN
Binding site976,997
Score0.833
Seed1
Au0.529
Energy-19.6
Binding len21
Me-4.762
Phylopstem4.897937937499999
Phylopflank5.25147426875
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure