Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGAGTCCTGGGGAATGGAGA&TCATCCATTTCTTCTGACTTCT
..((((((..((((((((((((&)).))))))))))..)))))).
Details
MiRNAhsa-miR-3198
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1320,1342
Score0.923
Seed1
Au0.618
Energy-19.9
Binding len22
Me-7.256
Phylopstem4.575240076923077
Phylopflank3.51821764
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure