Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGAGTCCTGGGGAATGGAGA&TCTTTATACCCTTGTGATGAATCCAG
.((((((((.((((.(((((((&))))))).)))).).)))...)))).
Details
MiRNAhsa-miR-3198
RefseqIDNM_004362
GeneSymbolCLGN
Binding site801,827
Score1.0
Seed1
Au0.618
Energy-17.4
Binding len26
Me-5.771
Phylopstem3.591926666666667
Phylopflank4.769641448749999
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure