Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGACTGCCTTAGGAGAAAGTT&AGCCTCCTAGAGGATGTGGTTCCTC
(((((((((((((((((......&.))))).))))...)))))))).
Details
MiRNAhsa-miR-3199
RefseqIDNM_004362
GeneSymbolCLGN
Binding site874,899
Score0.846
Seed1
Au0.588
Energy-19.3
Binding len23
Me-3.938
Phylopstem4.6243989999999995
Phylopflank4.75210900625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure