Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGAGTCTACAGCAGGG&CCTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCT
(((((((..(((((((.&)))))))...))).....................)))).
Details
MiRNAhsa-miR-4294
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1051,1090
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len39
Me-7.308
Phylopstem5.597433857142858
Phylopflank4.9222416875
Longest consecutive pairings7
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure