Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGAGTCTAGGATTCCA&GGAATCTGGAGTCCT
..(((.((((.((((((.&)))))))))).))).
Details
MiRNAhsa-miR-4309
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1270,1285
Score0.846
Seed0
Au0.603
Energy-19.1
Binding len15
Me-9.683
Phylopstem2.3360176666666668
Phylopflank4.30721465125
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure