Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCTGGAGTTTCTTCTT&GAAGAGACGCGGGGAC
((((((..((((((((..&)))))))).)))))).
Details
MiRNAhsa-miR-4308
RefseqIDNM_004362
GeneSymbolCLGN
Binding site38,54
Score0.923
Seed0
Au0.338
Energy-20.3
Binding len16
Me-7.795
Phylopstem0.155563175
Phylopflank0.4516864857142857
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure