Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTGAGGCTAGCTGGTG&GCTGGCTGGCTTGATG
.((.((((((((((((.&)))))))))))).)).
Details
MiRNAhsa-miR-4316
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1054,1070
Score0.885
Seed0
Au0.618
Energy-19.6
Binding len16
Me-6.825
Phylopstem4.8240744583333335
Phylopflank5.1052338625
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure