Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTTGGGTCTAGGGGTCAGGA&TCCTGATCCTTCTGCCGTCAAACCAGAAGACTGG
(((((.(((..(((((((((((&)))))))))))..)))............))))).
Details
MiRNAhsa-miR-4259
RefseqIDNM_004362
GeneSymbolCLGN
Binding site972,1006
Score0.846
Seed0
Au0.559
Energy-22.4
Binding len34
Me-9.906
Phylopstem4.695841545454545
Phylopflank4.9524322625
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure