Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTTGGGTCTAGGGGTCAGGA&CCTGATCCTAATGCTGAAAAACCTGATGACTGG
(((((((((...(((((((((.&)))))))))...........))))...))))).
Details
MiRNAhsa-miR-4259
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1087,1120
Score0.846
Seed1
Au0.544
Energy-20.3
Binding len33
Me-11.352
Phylopstem3.9345295555555557
Phylopflank4.3235245450000015
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure