Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGGAGTCAGGGGAGGGC&GCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTGAT
((((((((((((((.(((..&.))).))..))))).....................))))))).
Details
MiRNAhsa-miR-4270
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1021,1093
Score0.872
Seed1
Au0.574
Energy-20.8
Binding len43
Me-4.673
Phylopstem5.770976081081081
Phylopflank4.700649806249999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure