Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGTCCCGGGGAGGGGGG&TCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
((((((((((.(((((((&))))))).))...............))))..............)))).
Details
MiRNAhsa-miR-4281
RefseqIDNM_004362
GeneSymbolCLGN
Binding site978,1026
Score0.846
Seed1
Au0.574
Energy-18.2
Binding len48
Me-6.762
Phylopstem4.791815769230768
Phylopflank5.106237512500001
Longest consecutive pairings7
Position of longest consecutive pairings41
Pairings in 3prime end7
PositionCDS
2D Structure