Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCAGATCAGAGCCTTGC&GCGCGGCCGCCGGCGGGACTGGTCTGAA
..(((((((((...(((((&.))))).))))))))).
Details
MiRNAhsa-miR-4330
RefseqIDNM_004362
GeneSymbolCLGN
Binding site13,41
Score0.846
Seed1
Au0.324
Energy-17.6
Binding len17
Me-10.45
Phylopstem0.8770920333333334
Phylopflank0.26791887000000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure