Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGATGGATAGCAAGGAAGCC&GGTTCCTCCTATCAAACCTCC
.((((...(((((..(((.((((&))))))).)))))...)))).
Details
MiRNAhsa-miR-3605-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site891,912
Score0.923
Seed0
Au0.588
Energy-17.6
Binding len21
Me-11.144
Phylopstem3.6131879400000004
Phylopflank4.7790844425
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure