Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCAGCACCCTATGTCCTTTCT&GGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGA
(((((.(((((...((((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-3617-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1142,1191
Score1.0
Seed0
Au0.544
Energy-18.9
Binding len17
Me-11.331
Phylopstem3.4103632000000004
Phylopflank3.7908931824999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure