Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGCAGGCAGGCTGGTGCAGC&GCTGTATTAGCAAAACCATTCATTTTTGCTGAT
((((((((...(((((((((((&)))))))))))....)).........)))))).
Details
MiRNAhsa-miR-3619-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site490,523
Score0.846
Seed1
Au0.706
Energy-23.7
Binding len33
Me-9.061
Phylopstem5.473914636363637
Phylopflank4.08094746375
Longest consecutive pairings11
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure