Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCACGGGAGCTCAGGTGAG&CTTGGACATCTGAGCTGTCACTGCCG
..((((.((.((((((((((..&.)))))))))).))..)))).
Details
MiRNAhsa-miR-3622a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site67,93
Score1.0
Seed0
Au0.515
Energy-25.6
Binding len21
Me-7.743
Phylopstem0.34218728
Phylopflank0.34028324500000007
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure