Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGTGTCTGTAGAGTCC&CTTTAAGGACATGCCTT
((((((((((.(((((...&))))).)))))))))).
Details
MiRNAhsa-miR-3650
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2506,2523
Score0.923
Seed1
Au0.691
Energy-17.3
Binding len17
Me-6.762
Phylopstem5.6133421
Phylopflank4.568566672499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure