Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGACAGGAGAGCATTTTGA&TCAAGATGGTATTGATTGTGGAGGTGCATACATTAAACTCCTAGCAGA
.(((..((((((.((((((((&)))))))).)...........................)))))..))).
Details
MiRNAhsa-miR-3660
RefseqIDNM_004362
GeneSymbolCLGN
Binding site555,603
Score0.846
Seed0
Au0.647
Energy-15.3
Binding len48
Me-11.102
Phylopstem6.39970875
Phylopflank5.19634343
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end8
PositionCDS
2D Structure