Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTGCAAGTGTAGATGCCGA&CGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGC
(((((..(((.((((((((((&.)))).)))))).)))..))))).
Details
MiRNAhsa-miR-3666
RefseqIDNM_004362
GeneSymbolCLGN
Binding site47,91
Score0.923
Seed0
Au0.5
Energy-19.9
Binding len24
Me-10.207
Phylopstem0.7285948181818181
Phylopflank0.3671943110526316
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end8
Position5UTR
2D Structure