Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGTGGATGATGCACTCTGTGC&GCCAGAGTGGTTTACCCCATTCACA
..(((((((...(((((((.((&)))))))))........))))))).
Details
MiRNAhsa-miR-3681-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2641,2666
Score0.846
Seed1
Au0.662
Energy-19.0
Binding len25
Me-12.371
Phylopstem4.297175285714286
Phylopflank4.487217529999999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure