Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAG&CTCCTAGAGGATGTGGTTCCTCCTAT
(((((.(((((((((((((&))))....)))...))))))))))).
Details
MiRNAhsa-miR-3180
RefseqIDNM_004362
GeneSymbolCLGN
Binding site877,903
Score0.808
Seed0
Au0.559
Energy-18.8
Binding len26
Me-5.839
Phylopstem4.52243995
Phylopflank4.67957591875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure