Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCCTCTAGGGCCTGCAGTCT&AGAAAGCAGCCCTGGAAAAACCAATGGACC
.(((((((((((.((((..(((&)))..))))))))))).........)))).
Details
MiRNAhsa-miR-3909
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1697,1727
Score0.923
Seed1
Au0.588
Energy-23.3
Binding len30
Me-5.082
Phylopstem3.652040675
Phylopflank3.93647615
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure