Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTGGGACTGATCTTGATGTCT&AGACATTTATTTTAGTCCTT
...((((((((....(((((((&)))))))....)))))))).
Details
MiRNAhsa-miR-3913-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2079,2099
Score0.923
Seed0
Au0.706
Energy-18.5
Binding len20
Me-12.743
Phylopstem2.2477716250000004
Phylopflank3.3308828100000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure