Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGAGGAAGAAATGGCTGGTTCTCAG&GGGAATCTGGAGTCCTCGAAAAATTCCTAATCCAGATTATTTCGAAGATGATCATCCATTTCTTCTGACTTC
(((.(((((((((((.(((((.((..&.)).))))).)))))))))))..))).
Details
MiRNAhsa-miR-3916
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1269,1341
Score0.846
Seed0
Au0.632
Energy-22.6
Binding len27
Me-7.203
Phylopstem3.7475172727272725
Phylopflank3.9349092337499987
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure