Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTCGGACTGAGCAGGTGGG&CGACTTGGACATCTGAGCT
(((((((.((..(((((.(.&).)))))..))))))))).
Details
MiRNAhsa-miR-3917
RefseqIDNM_004362
GeneSymbolCLGN
Binding site64,83
Score0.846
Seed1
Au0.412
Energy-20.2
Binding len19
Me-12.423
Phylopstem1.0451572857142857
Phylopflank0.31171837375000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure