Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGAGATCGTCGAGGTTGG&AGCCTCCTAGAGGATGTGGTTCCTCC
.(((((((((.((((((((..&))))))...)).)))....)))))).
Details
MiRNAhsa-miR-3150b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site874,900
Score0.821
Seed1
Au0.574
Energy-18.1
Binding len26
Me-6.618
Phylopstem5.287294307692307
Phylopflank4.662587242499999
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure