Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACTAGTAATGTTGGATTAGGG&TCTTAATCCAGCATGTCG
.....(..((((((((((((((&))))))))))))))..).
Details
MiRNAhsa-miR-3923
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1158,1176
Score0.846
Seed0
Au0.485
Energy-18.3
Binding len18
Me-17.523
Phylopstem2.199359428571429
Phylopflank3.6889861262499997
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure