Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGCCAAAAAGCAGGCAGAGA&CTGCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCTT
.(((((...((((((......&.))))))...))))).
Details
MiRNAhsa-miR-3926
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1019,1066
Score0.865
Seed0
Au0.603
Energy-18.5
Binding len16
Me-8.94
Phylopstem5.243431166666666
Phylopflank5.0609155375
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure