Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGTAGATATTTGATAGGCAT&GTCTATGACCTCTGATATCTACTTT
.((((((((((((.((((((..&)))))).).....))))))))))).
Details
MiRNAhsa-miR-3927-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1368,1393
Score0.846
Seed1
Au0.662
Energy-17.4
Binding len25
Me-4.65
Phylopstem3.1599333058823533
Phylopflank3.2344202400000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure