Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGCTGATGTGAGTAGACCACT&AGTGGTTTACCCCATTCACAAAATTTCTTA
((((....(((((((((((((((&)))))))))).....))))).....)))).
Details
MiRNAhsa-miR-3929
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2646,2676
Score0.846
Seed0
Au0.706
Energy-17.7
Binding len30
Me-13.815
Phylopstem5.307087
Phylopflank3.8491861487499994
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure