Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGTGTGGAAACTGAGGCAG&TGCCAGACCTGAACTTTAATCAGTCTGCACATCCTGT
.((((((((.(.(((((((((.&))))...............))))).).)))).)))).
Details
MiRNAhsa-miR-3934-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2012,2049
Score0.846
Seed1
Au0.647
Energy-20.4
Binding len37
Me-8.383
Phylopstem3.507330666666667
Phylopflank3.560535517499999
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure