Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCTCAGGTTGCACAGCTGGGA&TCCCAATGATAAAAAACCTGAGGAA
(.((((((((...((..(((((&))))).))......)))))))).).
Details
MiRNAhsa-miR-3934-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site927,952
Score0.846
Seed1
Au0.647
Energy-18.9
Binding len25
Me-12.795
Phylopstem5.692003875
Phylopflank4.980173348750001
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure