Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACGCGCAGACCACAGGATGTC&CCTGCTGGCTGGCT
...((.(((.(((((((.....&)))).)))))))).
Details
MiRNAhsa-miR-3939
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1051,1065
Score0.846
Seed0
Au0.618
Energy-16.4
Binding len14
Me-9.658
Phylopstem5.019456375
Phylopflank5.0123081874999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure