Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&GGAGTCCTCGAAAAATTCCTAATCCAG
.((((((((((.(((((((.&))))))).)........))))))))).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1277,1304
Score0.846
Seed1
Au0.632
Energy-21.2
Binding len27
Me-7.14
Phylopstem4.488387333333333
Phylopflank3.6263035824999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure