Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&CAGAGATTAAATATAAGACACCTCAACCTATA
(((((((((((.(..(((((&))))).............).))))))))))).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site260,292
Score0.942
Seed1
Au0.676
Energy-21.0
Binding len32
Me-8.877
Phylopstem1.3152350181818184
Phylopflank2.3464036087499993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure