Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&CAGAGTGGTTTACCCCATTCACA
(((((.(((((...((((((&))))))......)))))))))).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2643,2666
Score0.846
Seed0
Au0.662
Energy-20.8
Binding len23
Me-11.331
Phylopstem3.7077561666666665
Phylopflank4.49359778
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure