Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCCGGATCCCAGCCCACTT&GGCGGGACTGGTCTGA
(((.((((.((((.(((.....&))))))))))).))).
Details
MiRNAhsa-miR-3940-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site24,40
Score0.846
Seed0
Au0.309
Energy-21.0
Binding len16
Me-8.883
Phylopstem0.4412129999999999
Phylopflank0.4266503854411765
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure