Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCGGGCTGGCCTGCTGCTCCGG&CCGCCGGCGGGACTGGTCTGAAG
(((((((((((((((((...(((&))).))))))).)))))))))).
Details
MiRNAhsa-miR-3944-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site19,42
Score1.0
Seed1
Au0.309
Energy-27.6
Binding len23
Me-3.938
Phylopstem0.16191098333333329
Phylopflank0.3959483388461539
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure