Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCATAGGAGAGGGTTGATAT&CAAGCCTTTTGGCTATGTTTG
.((((((((((((((.(((....&))).))))))..)))))))).
Details
MiRNAhsa-miR-3945
RefseqIDNM_004362
GeneSymbolCLGN
Binding site130,151
Score0.846
Seed1
Au0.647
Energy-16.8
Binding len21
Me-4.026
Phylopstem1.6583823312500001
Phylopflank0.8191280937499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure