Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTTCCCTCTCCAAATGTGTCT&AGACACGGATGGAGAATGGGAGGCA
(.(((((((((((..(((((((&)))))))..))))))..))))).).
Details
MiRNAhsa-miR-642b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1125,1150
Score1.0
Seed1
Au0.515
Energy-27.2
Binding len25
Me-6.694
Phylopstem2.8567757000000005
Phylopflank3.8966899250000013
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure