Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTTACTCCCTCAGGCACTG&GGTGAAATGCTTGAAAAAGAAGAGGAAAGTGAACCTGAGGAAAAGAGTGAAGAA
(((((((((((((((((((.&.))))..)))))))....)))))).)).
Details
MiRNAhsa-miR-550b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1753,1807
Score0.923
Seed1
Au0.632
Energy-21.8
Binding len28
Me-3.938
Phylopstem4.603023230769231
Phylopflank3.6759642500000003
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure