Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAGGAGACGGGAACATGGAGC&GCCTTTTGGCTATGTTTGGGTCTTCTG
..(((((((..((((((((...&.))))))))..))))))).
Details
MiRNAhsa-miR-4428
RefseqIDNM_004362
GeneSymbolCLGN
Binding site133,160
Score0.923
Seed1
Au0.632
Energy-18.3
Binding len19
Me-9.024
Phylopstem2.466707875
Phylopflank0.9246739562499999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure