Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAGGAGACGGGAACATGGAGC&CTGCACATCCTGTTTCTA
...((((((((((...((.((.&)).))..)))))))))).
Details
MiRNAhsa-miR-4428
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2036,2054
Score0.846
Seed0
Au0.647
Energy-16.2
Binding len18
Me-8.34
Phylopstem3.049111
Phylopflank3.5491344450000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure