Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGATTGTTTCTTTTGCCGTGCA&TGTCACTGCCGAAAACAGGCCGCAAGAGAGATAATCA
.(((((((((((((((.((...&.)).))))))))))))))).
Details
MiRNAhsa-miR-4445-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site82,119
Score1.0
Seed1
Au0.544
Energy-21.2
Binding len20
Me-3.793
Phylopstem0.16444998666666663
Phylopflank0.66750786875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure