Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTGGCAGTGACATGGGT&ACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCG
...((((((((((((((.....&.)))))))))).......)))).
Details
MiRNAhsa-miR-4446-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site52,104
Score0.846
Seed0
Au0.544
Energy-23.4
Binding len23
Me-6.515
Phylopstem0.3233261333333332
Phylopflank0.26125333124999994
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end3
Position5UTR
2D Structure