Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCCAAGTGGAAGTTACTTTA&GGAATTTCCACTTAAATGGCTA
(((((((((((((((.((...&))))))))))))....))))).
Details
MiRNAhsa-miR-4480
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2295,2317
Score0.846
Seed1
Au0.721
Energy-18.6
Binding len22
Me-4.171
Phylopstem5.876272952631578
Phylopflank4.4475427312499995
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure