Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGGCGGGAGAAGCCCCA&GCATTTCCAAGCCTTTTG
(((((((.(((((.((....&)).)))))..))))))).
Details
MiRNAhsa-miR-4484
RefseqIDNM_004362
GeneSymbolCLGN
Binding site123,141
Score0.846
Seed1
Au0.603
Energy-17.1
Binding len18
Me-7.108
Phylopstem2.210896857142857
Phylopflank0.88750956875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure